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CompositionalSR (version 1.0)

Leave-one-out cross-validation for the GWalphaR model: Leave-one-out cross-validation for the GW\(\alpha\)R model

Description

Leave-one-out cross-validation for the GW\(\alpha\)R model

Usage

cv.gwar(y, x, a = c(0.1, 0.25, 0.5, 0.75, 1), coords, h, nfolds = 10, folds = NULL)

Value

A list including:

runtime

The runtime required by the cross-validation.

perf

A matrix with the Kullback-Leibler divergence of the observed from the fitted values. Each row corresponds to a value of \(\alpha\) and each column to a value of h.

opt

A vector with the minimum Kullback-Leibler divergance, the optimal value of \(\alpha\) and h.

Arguments

y

A matrix with compositional data. zero values are allowed.

x

A matrix with the continuous predictor variables or a data frame including categorical predictor variables.

a

The value of the power transformation, it has to be between -1 and 1. If zero values are present it has to be greater than 0. If \(\alpha=0\) the isometric log-ratio transformation is applied.

coords

A matrix with the coordinates of the locations. The first column is the latitude and the second is the longitude.

h

A vector with bandwith values.

nfolds

The number of folds to split the data.

folds

If you have the list with the folds supply it here. You can also leave it NULL and it will create folds.

Author

Michail Tsagris.

R implementation and documentation: Michail Tsagris mtsagris@uoc.gr.

Details

The \(\alpha\)-transformation is applied to the compositional data and the numerical optimisation is performed for the regression, unless \(\alpha=0\), where the coefficients are available in closed form.

References

Tsagris M. (2025). The \(\alpha\)--regression for compositional data: a unified framework for standard, spatially-lagged, and geographically-weighted regression models. https://arxiv.org/pdf/2510.12663

Tsagris M. (2015). Regression analysis with compositional data containing zero values. Chilean Journal of Statistics, 6(2): 47-57. https://arxiv.org/pdf/1508.01913v1.pdf

Tsagris M.T., Preston S. and Wood A.T.A. (2011). A data-based power transformation for compositional data. In Proceedings of the 4th Compositional Data Analysis Workshop, Girona, Spain. https://arxiv.org/pdf/1106.1451.pdf

See Also

gwar, me.gwar cv.alfaslx

Examples

Run this code
data(fadn)
coords <- fadn[, 1:2]
y <- fadn[, 3:7]
x <- fadn[, 8]
mod <- gwar(y, x, a = 1, coords, h = 0.001)

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